BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D04SP1|AL426021
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig143 504 e-142
>3x_Contig143
Length = 1412
Score = 504 bits (254), Expect = e-142
Identities = 261/262 (99%), Gaps = 1/262 (0%)
Strand = Plus / Minus
Query: 1 aagagattaaagaaattcgtgattataagattagtgctgcccgcag-tacaaggaccgta 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 262 aagagattaaagaaattcgtgattataagattagtgctgcccgcaggtacaaggaccgta 203
Query: 60 cggttgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cggttgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcgg 143
Query: 120 tgccattatacagagccatctgtgctagaactgggtacggtggtattccaatcacagaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tgccattatacagagccatctgtgctagaactgggtacggtggtattccaatcacagaca 83
Query: 180 agcgtaagtttaccgatgataagttgatacctgttgattctaataagagaataagaattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 agcgtaagtttaccgatgataagttgatacctgttgattctaataagagaataagaattt 23
Query: 240 cgtttaccagtgaagtgtcaca 261
||||||||||||||||||||||
Sbjct: 22 cgtttaccagtgaagtgtcaca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7209
Number of Sequences: 1807
Number of extensions: 7209
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)